BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D04LP1|AL425681
(749 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1788 1384 0.0
>3x_Contig1788
Length = 28493
Score = 1384 bits (694), Expect = 0.0
Identities = 737/752 (98%), Gaps = 3/752 (0%)
Strand = Plus / Plus
Query: 1 gatcaaaaaggattgagactctctcaccttaaacctttgccagaagaaaatttgtagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26439 gatcaaaaaggattgagactctctcaccttaaacctttgccagaagaaaatttgtagaaa 26498
Query: 61 caacgaa-taacactggacgttaccgttcccctgtttccaaacacttgaaaacttcaaat 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26499 caacgaagtaacactggacgttaccgttcccctgtttccaaacacttgaaaacttcaaat 26558
Query: 120 caatctgtaaaactgttcattgaaaacaagtctcatatctgttcatgctatatataccga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26559 caatctgtaaaactgttcattgaaaacaagtctcatatctgttcatgctatatataccga 26618
Query: 180 aattccatattctgtcgttatataatgacagtgactccctaaaammagttaagtgatacg 239
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 26619 aattccatattctgtcgttatataatgacagtgactccctaaaaaaagttaagtgatacg 26678
Query: 240 aagctatcgatggaataggtaatttctggtgaaaaattgagaagcgatgagctaagacaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26679 aagctatcgatggaataggtaatttctggtgaaaaattgagaagcgatgagctaagacaa 26738
Query: 300 gacaaagtggacgtttgtmgattcccagcmggcctgtgctttcctgggacgatgagctgg 359
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 26739 gacaaagtggacgtttgtagattcccagcaggcctgtgctttcctgggacgatgagctgg 26798
Query: 360 gaagactcttaccaatgctattgttgctctgctctgcaga-caga-ccacaggcagaagt 417
|||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 26799 gaagactcttaccaatgctattgttgctctgctctgcagagcagagcaacaggcagaagt 26858
Query: 418 gagcccaacagcygaggaaaccctcactatatactgaatgttgttacttgatctatatac 477
|||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 26859 gagctcaacagctgaggaaaccctcactatatactgaatgttgtaacttgatctatatac 26918
Query: 478 agtagcacgccagggcgccttcaggtgactttcaactggtgtcaacacgttgtgggaatc 537
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 26919 agtagcacgccagggcgccttcaggtgactttcaactggtgttaacacgttgtgggaata 26978
Query: 538 aagatatagagagtatcccctttcgacaaattcttctgtttttatacttcgaaagtcaaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26979 aagatatagagagtatcccctttcgacaaattcttctgtttttatacttcgaaagtcaaa 27038
Query: 598 ttgtgtttcttaatctgaaacactcttaactgtcattgagaacttattaaataaagagag 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27039 ttgtgtttcttaatctgaaacactcttaactgtcattgagaacttattaaataaagagag 27098
Query: 658 aaagggttagttgcagtyaatattggaatgggaaaagagttcgaacggggcttagacagc 717
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27099 aaagggttagttgcagtcaatattggaatgggaaaagagttcgaacggggcttagacagc 27158
Query: 718 gcttyttgttaaccggaacacttaattgctgc 749
|||| |||||||||||||||||||||||||||
Sbjct: 27159 gcttcttgttaaccggaacacttaattgctgc 27190
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5243
Number of Sequences: 1807
Number of extensions: 5243
Number of successful extensions: 129
Number of sequences better than 1.0e-20: 1
length of query: 749
length of database: 10,358,551
effective HSP length: 16
effective length of query: 733
effective length of database: 10,329,639
effective search space: 7571625387
effective search space used: 7571625387
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)